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#\#CIF_1.1 ################################################################################ # # # This CIF is a part of the B-IncStrDB # # (Bilbao Incommensurate Structures Database) # # http://www.cryst.ehu.eus/bincstrdb/ # # # # Please note that the structure of the CIF file may differ from the one # # deposited, as it may have been modified to comply with the standard. The # # file has been validated against official dictionaries as well as local # # dictionaries including non-standard data names used by SHELXL (Sheldrick, # # G. M. (2008). Acta Cryst. A 64, 112-122) and JANA (Petricek, V., Dusek, M. # # and Palatinus, L. (2014), Z. Kristallogr. 229, 345-352). # # # # For comments and/or criticisms, please e-mail to administrador-bcs@ehu.es # # # ################################################################################ #======================================================================= data_global #======================================================================= _audit_creation_method 'Jana2020 1.3.47' # 1. PROCESSING SUMMARY (IUCr Office Use Only) _journal_date_recd_electronic ? _journal_date_to_coeditor ? _journal_date_from_coeditor ? _journal_date_accepted ? _journal_date_printers_first ? _journal_date_printers_final ? _journal_date_proofs_out ? _journal_date_proofs_in ? _journal_coeditor_name ? _journal_coeditor_code ? _journal_coeditor_notes ; ? ; _journal_techeditor_code ? _journal_paper_category ? _journal_techeditor_notes ; ? ; _journal_coden_ASTM ? _journal_name_full 'Acta Crystallographica Section B' _journal_year 2026 _journal_volume 82 _journal_issue 3 _journal_page_first 344 _journal_page_last 351 _journal_paper_doi https://doi.org/10.1107/S205252062600449X _journal_suppl_publ_number ? _journal_suppl_publ_pages ? #======================================================================= # 2. SUBMISSION DETAILS _publ_contact_author_name "Komatsu, Kazuki" _publ_contact_author_address ; ? ; _publ_contact_author_email ? _publ_contact_author_fax ? _publ_contact_author_phone ? _publ_requested_journal 'Acta Crystallographica Section B' _publ_requested_category ? _publ_contact_letter ; ? ; #======================================================================= # 3. TITLE AND AUTHOR LIST _publ_section_title ; Incommensurate structure of AlPO~4~-5 and its stability ; loop_ _publ_author_name _publ_author_address 'Komatsu, Kazuki' ;Geochemical Research Center, Graduate School of Science, The University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo, 113-0033, Japan ; 'Ikeda, Takuji' ;Research Institute for Chemical Process Technology, National Institute of Advanced Industrial and Science and Technology, 4-2-1 Nigatake, Miyagino-ku, Sendai, Miyagi, 983-8551, Japan ; 'Kodaira, Tetsuya' ;Research Institute for Chemical Process Technology, National Institute of Advanced Industrial and Science and Technology, 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8565, Japan ; #======================================================================= # 4. TEXT _publ_section_synopsis ; ? ; _publ_section_abstract ; ? ; _publ_section_comment ; ? ; _publ_section_introduction ; ? ; _publ_section_experimental ; ? ; _publ_section_exptl_prep ; ? ; _publ_section_exptl_refinement ; ? ; _publ_section_exptl_solution ; ? ; _publ_section_discussion ; ? ; _publ_section_acknowledgements ; ? ; _publ_section_references ; ; _publ_section_figure_captions ; ? ; _publ_section_table_legends ; ? ; #======================================================================= data_I #======================================================================= # 5. CHEMICAL DATA _chemical_name_systematic ? _chemical_name_common ? _chemical_formula_moiety ? _chemical_formula_structural ? _chemical_formula_analytical ? _chemical_formula_iupac ? _chemical_formula_sum 'Al1 O4 P1' _chemical_formula_weight 122 _chemical_melting_point ? _chemical_compound_source ? _chemical_absolute_configuration ? #======================================================================= # 6. CRYSTAL DATA _space_group_crystal_system hexagonal _space_group_ssg_name 'P6(00\g)h' loop_ _space_group_symop_ssg_id _space_group_symop_ssg_operation_algebraic 1 x1,x2,x3,x4 2 -x2,x1-x2,x3,x4+1/3 3 -x1+x2,-x1,x3,x4+2/3 4 -x1,-x2,x3,x4+1/2 5 x2,-x1+x2,x3,x4+5/6 6 x1-x2,x1,x3,x4+1/6 _cell_length_a 13.76570(17) _cell_length_b 13.76570(17) _cell_length_c 8.37040(12) _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 120 _cell_volume 1373.64(3) _cell_modulation_dimension 1 loop_ _cell_wave_vector_seq_id _cell_wave_vector_x _cell_wave_vector_y _cell_wave_vector_z 1 0.000000 0.000000 0.367100 _cell_formula_units_Z 12 _cell_measurement_reflns_used 17280 _cell_measurement_theta_min 2.94 _cell_measurement_theta_max 26.33 _cell_measurement_temperature 295 _cell_special_details ? _exptl_crystal_type_of_structure mod _exptl_crystal_density_diffrn 1.7691 _exptl_crystal_density_meas ? _exptl_crystal_density_method ? _exptl_crystal_F_000 720 _exptl_absorpt_coefficient_mu 0.672 _exptl_crystal_description ? _exptl_crystal_size_max 0.10 _exptl_crystal_size_mid 0.08 _exptl_crystal_size_min 0.07 _exptl_crystal_size_rad ? _exptl_crystal_colour ? _exptl_absorpt_correction_type 'multi-scan' _exptl_absorpt_process_details ; CrysAlisPro 1.171.44.103a (Rigaku Oxford Diffraction, 2025) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _exptl_absorpt_correction_T_min 0.81 _exptl_absorpt_correction_T_max 1 loop_ _exptl_crystal_face_index_h _exptl_crystal_face_index_k _exptl_crystal_face_index_l _exptl_crystal_face_perp_dist ? ? ? ? #======================================================================= # 7. EXPERIMENTAL DATA _exptl_special_details ? _diffrn_ambient_temperature 295 _diffrn_source 'Rotating-anode X-ray tube' _diffrn_source_power ? _diffrn_source_voltage ? _diffrn_source_current ? _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_radiation_monochromator 'mirror' _diffrn_measurement_device 'four-circle diffractometer' _diffrn_measurement_device_type 'ROD, SynergyCustom system, HyPix' _diffrn_detector 'Hybrid Pixel Array Detector' _diffrn_detector_area_resol_mean 10.0000 _diffrn_measurement_method '\w scans' _diffrn_measurement_specimen_support ? _diffrn_reflns_number 103791 _diffrn_reflns_theta_min 1.71 _diffrn_reflns_theta_max 26.37 _diffrn_reflns_theta_full 26.37 _diffrn_measured_fraction_theta_max 1 _diffrn_measured_fraction_theta_full 1 _diffrn_reflns_av_R_equivalents 0.0565 _diffrn_reflns_av_unetI/netI 0.0066 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_k_min -17 _diffrn_reflns_limit_k_max 17 _diffrn_reflns_limit_l_min -10 _diffrn_reflns_limit_l_max 10 _diffrn_reflns_limit_index_m_1_min -2 _diffrn_reflns_limit_index_m_1_max 2 _diffrn_reflns_reduction_process ? _diffrn_standards_number ? _diffrn_standards_interval_count ? _diffrn_standards_interval_time ? _diffrn_standards_decay_% ? loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l ? ? ? _diffrn_radiation_probe x-ray #======================================================================= # 8. REFINEMENT DATA _refine_special_details ? _reflns_number_total 8733 _reflns_number_gt 8597 _reflns_threshold_expression 'I>3\s(I)' _refine_ls_structure_factor_coef Fsqd _refine_ls_R_factor_gt 0.0824 _refine_ls_wR_factor_gt 0.2203 _refine_ls_R_factor_all 0.0835 _refine_ls_wR_factor_ref 0.2207 _refine_ls_goodness_of_fit_ref 7.4888 _refine_ls_goodness_of_fit_gt 7.5361 _refine_ls_restrained_S_gt ? _refine_ls_restrained_S_all ? _refine_ls_number_reflns 8733 _refine_ls_number_parameters 252 _refine_ls_number_restraints 0 _refine_ls_number_constraints 2 _refine_ls_weighting_scheme sigma _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.02P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_hydrogen_treatment ? _refine_ls_shift/su_max 0.0199 _refine_ls_shift/su_mean 0.0023 _refine_diff_density_max 0.66 _refine_diff_density_min -0.67 _refine_ls_extinction_method 'none' _refine_ls_extinction_coef ? _refine_ls_extinction_expression ? _refine_ls_abs_structure_details ; 0 of Friedel pairs used in the refinement ; _refine_ls_abs_structure_Flack ? _refine_ls_abs_structure_Rogers ? loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source Al 0.0645 0.0514 'International Tables Vol C tables 4.2.6.8 and 6.1.1.1' O 0.0106 0.0060 'International Tables Vol C tables 4.2.6.8 and 6.1.1.1' P 0.1023 0.0942 'International Tables Vol C tables 4.2.6.8 and 6.1.1.1' _computing_data_collection 'CrysAlisPro system (CCD 44.103a 64-bit (release 31-03-2025))' _computing_cell_refinement 'CrysAlisPro 1.171.44.103a (Rigaku OD, 2025)' _computing_data_reduction 'CrysAlisPro 1.171.44.103a (Rigaku OD, 2025)' _computing_structure_solution ; Jana2020 version 1.3.47 (Petricek, V., Dusek, M. & Palatinus L. (2023). Z. Kristallogr. 238(7-8), 271-282.) Superflip (Palatinus L. & Chapuis G. (2007). J. Appl. Cryst. 40, 786-790.) ; _computing_structure_refinement 'Jana2020 version 1.3.47 (Petricek, V., Dusek, M. & Palatinus L. (2023). Z. Kristallogr. 238(7-8), 271-282.)' _computing_molecular_graphics ; Jana2020 version 1.3.47 (Petricek, V., Dusek, M. & Palatinus L. (2023). Z. Kristallogr. 238(7-8), 271-282.) VESTA3 (Momma, K., Izumi, F. (2011). J. Appl. Crystallogr. 44(6), 1272-1276.) ; _computing_publication_material ? #======================================================================= # 9. ATOMIC COORDINATES AND DISPLACEMENT PARAMETERS loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_adp_type _atom_site_U_iso_or_equiv _atom_site_site_symmetry_multiplicity _atom_site_occupancy _atom_site_calc_flag P1 P 0.45425(7) 0.33235(7) 0.92319(11) Uani 0.0221(4) 6 1 d P2 P 0.33328(7) 0.45551(7) 0.42294(11) Uani 0.0217(4) 6 1 d Al1 Al 0.33220(7) 0.45424(7) 0.79830(11) Uani 0.0123(4) 6 1 d Al2 Al 0.45537(7) 0.33311(7) 0.29851(11) Uani 0.0119(4) 6 1 d O1 O 0.42184(18) 0.2104(2) 0.8603(4) Uani 0.0353(11) 6 1 d O7 O 0.2102(2) 0.42125(17) 0.3610(4) Uani 0.0336(11) 6 1 d O4 O 0.3630(2) 0.3636(2) 0.8602(4) Uani 0.0375(11) 6 1 d O6 O 0.4230(3) 0.5794(3) 0.3619(4) Uani 0.0390(12) 6 1 d O3 O 0.5779(3) 0.4238(3) 0.8613(4) Uani 0.0405(12) 6 1 d O8 O 0.3688(2) 0.3682(2) 0.3618(4) Uani 0.0397(12) 6 1 d O5 O 0.3333(2) 0.4553(2) 0.6121(4) Uani 0.0471(14) 6 1 d O2 O 0.4551(2) 0.3335(2) 1.1129(4) Uani 0.0477(14) 6 1 d loop_ _atom_site_aniso_label _atom_site_aniso_type_symbol _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 P1 P 0.0222(5) 0.0184(4) 0.0268(6) 0.0109(4) 0.0019(3) 0.0015(3) P2 P 0.0194(5) 0.0225(5) 0.0265(6) 0.0130(4) 0.0010(3) 0.0011(3) Al1 Al 0.0100(4) 0.0141(4) 0.0136(5) 0.0067(4) -0.0021(3) -0.0021(3) Al2 Al 0.0139(5) 0.0116(4) 0.0131(5) 0.0087(4) -0.0007(3) -0.0008(3) O1 O 0.0296(13) 0.0223(13) 0.0556(15) 0.0143(12) -0.0002(13) -0.0017(11) O7 O 0.0241(13) 0.0259(12) 0.0505(15) 0.0122(12) -0.0013(12) 0.0001(13) O4 O 0.0362(15) 0.0363(15) 0.0463(13) 0.0229(12) -0.0022(13) 0.0001(13) O6 O 0.0387(16) 0.0364(16) 0.0485(14) 0.0238(12) 0.0061(12) 0.0047(12) O3 O 0.0362(15) 0.0377(16) 0.0517(15) 0.0216(12) 0.0063(12) 0.0068(12) O8 O 0.0355(15) 0.0351(15) 0.0519(15) 0.0202(12) 0.0028(13) -0.0055(13) O5 O 0.0500(18) 0.0547(18) 0.0385(17) 0.0275(15) -0.0041(13) 0.0012(13) O2 O 0.0511(18) 0.0500(18) 0.0417(18) 0.0250(15) -0.0008(14) 0.0040(13) loop_ _atom_site_Fourier_wave_vector_seq_id _atom_site_Fourier_wave_vector_q1_coeff 1 1 2 2 loop_ _atom_site_displace_Fourier_id _atom_site_displace_Fourier_atom_site_label _atom_site_displace_Fourier_axis _atom_site_displace_Fourier_wave_vector_seq_id 1 P1 x 1 2 P1 y 1 3 P1 z 1 4 P1 x 2 5 P1 y 2 6 P1 z 2 7 P2 x 1 8 P2 y 1 9 P2 z 1 10 P2 x 2 11 P2 y 2 12 P2 z 2 13 Al1 x 1 14 Al1 y 1 15 Al1 z 1 16 Al1 x 2 17 Al1 y 2 18 Al1 z 2 19 Al2 x 1 20 Al2 y 1 21 Al2 z 1 22 Al2 x 2 23 Al2 y 2 24 Al2 z 2 25 O1 x 1 26 O1 y 1 27 O1 z 1 28 O1 x 2 29 O1 y 2 30 O1 z 2 31 O7 x 1 32 O7 y 1 33 O7 z 1 34 O7 x 2 35 O7 y 2 36 O7 z 2 37 O4 x 1 38 O4 y 1 39 O4 z 1 40 O4 x 2 41 O4 y 2 42 O4 z 2 43 O6 x 1 44 O6 y 1 45 O6 z 1 46 O6 x 2 47 O6 y 2 48 O6 z 2 49 O3 x 1 50 O3 y 1 51 O3 z 1 52 O3 x 2 53 O3 y 2 54 O3 z 2 55 O8 x 1 56 O8 y 1 57 O8 z 1 58 O8 x 2 59 O8 y 2 60 O8 z 2 61 O5 x 1 62 O5 y 1 63 O5 z 1 64 O5 x 2 65 O5 y 2 66 O5 z 2 67 O2 x 1 68 O2 y 1 69 O2 z 1 70 O2 x 2 71 O2 y 2 72 O2 z 2 loop_ _atom_site_displace_Fourier_param_id _atom_site_displace_Fourier_param_cos _atom_site_displace_Fourier_param_sin 1 0 0.02345(11) 2 -0.00514(8) 0.01465(10) 3 0.02805(18) -0.0186(2) 4 0.00101(10) -0.00047(10) 5 0.00063(9) -0.00105(9) 6 -0.00274(15) 0.00108(15) 7 -0.00073(11) 0.01479(10) 8 -0.00063(11) 0.01429(10) 9 0.03211(15) 0.0075(2) 10 0.00195(9) 0.00006(9) 11 0.00153(9) -0.00083(9) 12 0.00194(14) -0.00052(15) 13 -0.00319(11) 0.01541(10) 14 -0.01207(12) 0.02034(11) 15 0.0149(2) 0.03042(16) 16 -0.00063(9) 0.00089(9) 17 0.00006(11) 0.00100(10) 18 0.00028(16) 0.00267(14) 19 -0.00672(10) 0.01273(10) 20 -0.00693(11) 0.01331(10) 21 0.03161(15) 0.0100(2) 22 0.00002(9) 0.00175(10) 23 0.00103(9) 0.00173(9) 24 -0.00057(15) -0.00218(14) 25 0.0039(3) 0.0157(3) 26 -0.0118(3) 0.0117(3) 27 0.0622(4) -0.0171(6) 28 0.0014(3) -0.0008(3) 29 0.0011(3) 0.0004(2) 30 -0.0020(6) -0.0030(4) 31 0.0029(3) 0.0089(3) 32 -0.0056(3) 0.0058(3) 33 0.0220(5) 0.0206(5) 34 0.0009(2) -0.0017(2) 35 0.0001(3) -0.0035(2) 36 0.0043(3) -0.0001(5) 37 0.0039(3) 0.0149(3) 38 -0.0102(3) 0.0106(3) 39 -0.0008(4) -0.0016(5) 40 0.0004(2) -0.0011(2) 41 -0.0010(2) 0.0013(2) 42 -0.0035(4) 0.0056(3) 43 0.0031(4) 0.0078(3) 44 -0.0055(3) 0.0060(3) 45 0.0102(5) -0.0330(4) 46 0.0019(3) -0.0036(2) 47 0.0023(3) -0.0031(2) 48 0.0026(4) -0.0051(4) 49 0.0035(3) 0.0158(3) 50 -0.0109(3) 0.0116(3) 51 0.0160(6) -0.0521(4) 52 0.0017(3) -0.0016(3) 53 0.0007(3) -0.0022(3) 54 -0.0006(5) 0.0008(4) 55 0.0015(3) 0.0086(3) 56 -0.0071(3) 0.0069(3) 57 0.0726(4) 0.0197(7) 58 0.0018(3) 0.0015(3) 59 0.0026(3) 0.0007(3) 60 -0.0025(6) 0.0021(5) 61 -0.0225(4) 0.0291(3) 62 -0.0022(4) 0.0476(3) 63 0.0266(5) 0.0209(5) 64 0.0001(4) 0.0044(3) 65 -0.0018(4) 0.0010(4) 66 0.0034(5) 0.0009(5) 67 -0.0222(4) 0.0417(3) 68 0.0047(4) 0.0361(3) 69 0.0335(5) -0.0050(5) 70 -0.0003(3) -0.0017(4) 71 0.0041(3) -0.0015(4) 72 -0.0028(5) -0.0039(5) #======================================================================= # 10. MOLECULAR GEOMETRY loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_ssg_symmetry_1 _geom_bond_site_ssg_symmetry_2 _geom_bond_distance_av _geom_bond_distance_min _geom_bond_distance_max _geom_bond_publ_flag P1 O1 . . 1.615(9) 1.602(9) 1.635(9) ? P1 O4 . . 1.622(10) 1.615(10) 1.632(10) ? P1 O3 . . 1.628(7) 1.621(8) 1.633(8) ? P1 O2 . . 1.622(10) 1.602(10) 1.640(10) ? P2 O7 . . 1.610(8) 1.596(9) 1.622(9) ? P2 O6 . . 1.632(7) 1.622(8) 1.643(8) ? P2 O8 . . 1.615(11) 1.597(11) 1.632(11) ? P2 O5 . . 1.621(9) 1.605(10) 1.640(10) ? Al1 O1 . 6_5555 1.598(11) 1.584(12) 1.613(12) ? Al1 O4 . . 1.610(10) 1.600(10) 1.623(10) ? Al1 O3 . 4_6655 1.613(8) 1.602(8) 1.621(8) ? Al1 O5 . . 1.593(9) 1.580(10) 1.608(10) ? Al2 O7 . 5_5555 1.600(11) 1.590(11) 1.610(11) ? Al2 O6 . 4_6655 1.613(7) 1.603(8) 1.620(8) ? Al2 O8 . . 1.609(11) 1.599(11) 1.632(11) ? Al2 O2 . 1_5545 1.591(9) 1.565(10) 1.607(10) ? loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_ssg_symmetry_1 _geom_angle_site_ssg_symmetry_2 _geom_angle_site_ssg_symmetry_3 _geom_angle_av _geom_angle_min _geom_angle_max _geom_angle_publ_flag O1 P1 O4 . . . 109.2(4) 107.8(4) 111.2(4) ? O1 P1 O3 . . . 111.0(5) 101.5(4) 122.1(5) ? O1 P1 O2 . . . 110.5(5) 107.2(6) 112.0(5) ? O4 P1 O3 . . . 108.9(4) 104.0(4) 112.6(5) ? O4 P1 O2 . . . 108.6(6) 105.1(5) 111.7(6) ? O3 P1 O2 . . . 108.7(4) 106.0(5) 110.7(4) ? O7 P2 O6 . . . 109.6(4) 108.0(4) 111.1(5) ? O7 P2 O8 . . . 110.4(4) 104.4(4) 117.7(4) ? O7 P2 O5 . . . 109.2(5) 107.1(5) 112.8(5) ? O6 P2 O8 . . . 109.6(4) 96.7(4) 122.9(5) ? O6 P2 O5 . . . 107.9(4) 104.8(4) 109.8(4) ? O8 P2 O5 . . . 109.6(6) 107.3(6) 113.1(5) ? O1 Al1 O4 6_5555 . . 109.0(4) 107.2(4) 111.7(4) ? O1 Al1 O3 6_5555 . 4_6655 110.6(5) 98.8(4) 123.5(5) ? O1 Al1 O5 6_5555 . . 110.2(5) 106.0(6) 113.4(5) ? O4 Al1 O3 . . 4_6655 108.7(4) 103.2(4) 112.9(5) ? O4 Al1 O5 . . . 108.5(6) 105.6(5) 111.5(6) ? O3 Al1 O5 4_6655 . . 109.3(4) 107.8(4) 110.8(5) ? O7 Al2 O6 5_5555 . 4_6655 108.7(4) 104.9(4) 112.5(5) ? O7 Al2 O8 5_5555 . . 110.4(4) 100.3(4) 122.3(4) ? O7 Al2 O2 5_5555 . 1_5545 109.4(5) 107.7(5) 111.1(6) ? O6 Al2 O8 4_6655 . . 108.3(4) 99.5(4) 115.8(5) ? O6 Al2 O2 4_6655 . 1_5545 109.1(4) 106.4(4) 112.8(5) ? O8 Al2 O2 . . 1_5545 110.1(6) 106.8(7) 113.5(6) ? #=======================================================================